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ミスマッチ/ギャップを許容 ミスマッチのみ許容 ： 塩基まで (検索する配列長の25%まで)
双方向を検索 ＋方向のみ検索 －方向のみ検索

2025-04-03 06:42:10, GGGenome : DDBJ release 134.0 (Mar, 2024)

Summary:

Results:

検索語に色がつきます（ミスマッチ・挿入欠失）。

Apteryx australis mantelli genome assembly, scaffold: scaffold221.
LK064798.1:158108-158126
ATATACTTTCAAGAACCAATGGTATTAGCT158108TGCCAACAAATCTGCTCAGTATGCAACTCATTCAAATAATTAAAAAGTC
Hordeum vulgare subsp. spontaneum genome assembly, chromosome: 7H.
OX590747.1:231984460-231984478
GGCCCCAAATTGACTTGAACTTCTTTTTCA231984460TGCCAACAAATCTGCTCAGTTGAAGGCGATTCATTCCTCATTTTCCTTC
Sepiola atlantica genome assembly, chromosome: 12.
OY744526.1:62995839-62995857
CTAATCGCCAGAGACACTCCTACTGGGCAC62995839TGCCAACAAATCTGCTCAGGCATTCTTTGTGACCTAGGGGTCACTTCCT
Ferdinandea cuprea genome assembly, chromosome: 3.
OY754960.1:74564896-74564914
ATGACTTTATGAAAAAATTAGTTTTACATC74564896TGCCAACAAATCTGCTCAGTTGATTCCTCCTCGGTGTTATTGTTTGACT
Lymantria dispar genome assembly, chromosome: 18.
OY755143.1:14112420-14112438
AAGAGAAGGAAAACTTGACAGAAAACCATA14112420TGCCAACAAATCTGCTCAGCGCGATATAGTAAGTGCTTTCCATTATGGA
Sciaenops ocellatus chromosome 3.
CP136868.1:23638862-23638880
TCCACAAACAGATGGACAAAGTTCGCACGA23638862CTGAGCAGATTTGTTGGCAAACAGAAAAAATGGACACTTGTTCCTCTCT
Rhinatrema bivittatum genome assembly, chromosome: 8.
LR584394.1:38368777-38368795
GTTCTAGATCAAACTTTATTTTTTTCTCTT38368777CTGAGCAGATTTGTTGGCAATTTTAAATCACGTCGAGAGCGAGAAGCAG
Cinclus cinclus genome assembly, chromosome: 4.
OY759681.1:49069215-49069233
GGAATCAGGAATGGGGGAATGAAGCCCACT49069215CTGAGCAGATTTGTTGGCAGAACTTGTGTGACCCCATGGAAGACCCACA
Lathyrus sativus genome assembly, chromosome: 3.
OZ012737.1:691731343-691731361
GTTCGCACAACGAACTTGTTGATGTTTTTT691731343CTGAGCAGATTTGTTGGCAAGTTCACACAACGAACTTTTGGCCCCCTTC
Diabrotica virgifera virgifera genome assembly, chromosome: 2.
OU830625.2:7998738-7998756
ACCGGGTCATGAAGGGGTGCATGGGAATAA7998738CTGAGCAGATTTGTTGGCAAACAAGGCTCAAGGGAAACCTTTGTAGGCT
Luidia sarsii genome assembly, chromosome: 5.
OX465105.1:13162355-13162373
GTCCAATTTTTGTTTCTTCAAATGTTCAAG13162355CTGAGCAGATTTGTTGGCACTCAAGTAGCTCTTATGACATTGGCCCCTG
Sepiola atlantica genome assembly, chromosome: 30.
OY744544.1:60883368-60883386
AAGTGCCATTCGGCCTACAAAAAAAAATGG60883368CTGAGCAGATTTGTTGGCATTCCCATGTAGGGGCGCCTCAGGCGATTAG
Lucinisca nassula genome assembly, chromosome: 1.
OY757010.1:170859365-170859383
CTGCACAAAAATGTTGGCGTTTTAAAATTT170859365CTGAGCAGATTTGTTGGCATTTTAAAATTTATGAGCCGTATAAATTCAC

Data Export:

下記のフォーマットで最大100000件まで検索結果を取得できます。

Debug Info:

Redirect URI : https://gggenome.dbcls.jp/ja/ddbj/TGCCAACAAATCTIGCTCAG
lang : ja | db : ddbj | k : 0 | strand : | nogap : | query_string : TGCCAACAAATCTIGCTCAG | format : html | download : | debug : 

0.008 | 0.008 | search_start;
0.385 | 0.377 | search_plus_done; http://172.18.8.135:50400/match?q=TGCCAACAAATCTGCTCAG&k=0&no_gap=0&offset=0&limit=50
0.516 | 0.131 | search_minus_done; http://172.18.8.135:50400/match?q=CTGAGCAGATTTGTTGGCA&k=0&no_gap=0&offset=0&limit=45
0.521 | 0.005 | cgi_end;

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